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Move-rb: Faster Bi-Directional r-indexes and Approximate Pattern Matching

Fischer, Johannes et al.
arXiv (All) · Papers
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data-structures-and-algorithmsj-3
Approximate pattern matching (APM) on highly repetitive texts is a central task in bioinformatics. Bi-directional r-indexes support left- and right-extension of a pattern and thereby accelerate APM algorithms based on search schemes, but existing variants -- br-index and b-move -- suffer from two bo
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