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Correcting the Dropout-LayerNorm Expectation Gap Improves Protein Structure Models

Ellmen, Isaac et al.
arXiv (All) · Papers
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biomoleculesmachine-learning
Although $\mathbb{E}[\mathrm{dropout}(x)] = x$, here we show that $\mathbb{E}[\mathrm{LayerNorm}(\mathrm{dropout}(x))]$ is not equal to $\mathrm{LayerNorm}(x)$. Accordingly, the pattern of a Dropout layer followed by a LayerNorm, which is common to many AlphaFold2-based protein structure predictors,
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