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MIST: Multi-Scale Spatial Context for Gene Expression Prediction from Histology

Howlader, Koushik et al.
arXiv (All) · Papers
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computer-vision-and-pattern-recognition
Predicting spatial gene expression from standard H&E images could extend molecular analysis to tissues without spatial transcriptomic measurements. A standard Transformer applies self-attention over spots but ignores where each spot sits in the tissue, whereas a spot's molecular state depends on tis
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