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hpci improves reproducibility of computational biology research by integrating Continuous Integration with High Performance Computing clusters

Ignatius Jeppe Menzies et al.
HAL (France) · Papers
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bioinformaticsreproducibility
Motivation: The reproducibility crisis in bioinformatics and computational biology can be mitigated by using Continuous Integration (CI), a proven software engineering practice, to automate the testing of analysis pipelines and models. However, the adoption of CI in bioinformatics is limited as exis
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