computational-biology

Documents about computational-biology

• Classification of drug molecules considering their IC(50) values using mixed-integer linear programming based hyper-boxes method#934620Koc University Digital Collections
• The origins of SARS-CoV-2: A critical review#1015681eScholarship
• Data on European eel (Anguilla anguilla) hatching enzyme transcriptome and its collagenase-like activity in fertilised and pre-hatching embryos#417085AMS Acta
• Multi-decadal land use and land cover changes driven by the braided river Brahmaputra and its socio-economic implications in Assam, India#294279Figshare
• Coordination-Environment-Mediated Selective Recognition of As(III) and Cu(II): Ion-Specific Charge Transfer at Pt Single-Atom Sites on α‑Fe₂O₃ Nanospindles#440518Figshare
• Coordination-Environment-Mediated Selective Recognition of As(III) and Cu(II): Ion-Specific Charge Transfer at Pt Single-Atom Sites on α‑Fe₂O₃ Nanospindles#440519Figshare
• Coordination-Environment-Mediated Selective Recognition of As(III) and Cu(II): Ion-Specific Charge Transfer at Pt Single-Atom Sites on α‑Fe₂O₃ Nanospindles#440520Figshare
• Ultra-deep sequencing reveals pre-mRNA splicing as a sequence driven high-fidelity process#609443eScholarship
• High-throughput mapping of spontaneous mitotic crossover and genome instability events with sci-L3-Strand-seq#612290eScholarship
• Data source and code for “Scale-Invariant Multi-Target Optimization of Microalgal Environmental Factors Using an Evolutionary Variable-Branching Decision Tree”#922289Figshare
• Relation between the number of peaks and the number of reciprocal sign epistatic interactions#247086ISTA Publications
• Green bond proceeds and environmental project portfolio alignment: an auditable evidence-mapping framework for impact assessment follow-up using World Bank Finances one and projects data#298347Figshare
• Comprehensive Characterization of Cancer Driver Genes and Mutations#491952eScholarship
• Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales#492007eScholarship
• Accurate positioning of functional residues with robotics-inspired computational protein design#492090eScholarship
• Human and mouse essentiality screens as a resource for disease gene discovery#492120eScholarship
• mRNA display with library of even-distribution reveals cellular interactors of influenza virus NS1#609397eScholarship
• Universal chromatin state annotation of the mouse genome#609414eScholarship
• The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)#611989eScholarship
• The Resource Identification Initiative: A Cultural Shift in Publishing#612066eScholarship
• Genomic Classification of Cutaneous Melanoma#619926eScholarship
• Efficient and accurate determination of genome-wide DNA methylation patterns in Arabidopsis thaliana with enzymatic methyl sequencing#619940eScholarship
• Molecular modeling and ligand docking for Solute Carrier (SLC) transporters#996253eScholarship
• Additional file 1 of Service providers’ perspectives on the quality of care of a new complex psycho-oncological care programme in Germany – mixed methods external evaluation results#241906Figshare
• One Topological Operator, One Exactness Parameter: Unifying Active Biological Nematics and Black-Hole Horizons#438682Figshare
• Thousands of small, novel genes predicted in global phage genomes#784280eScholarship
• Establishment and characterization of an hACE2/hTMPRSS2 knock-in mouse model to study SARS-CoV-2#996187eScholarship
• Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos#612091eScholarship
• Gene and genome duplications have contrasting impacts on biosynthetic and flower developmental pathways in California poppy#612208eScholarship
• Chemistry of Class 1 CRISPR-Cas effectors: Binding, editing, and regulation#619952eScholarship
• Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation#629298eScholarship
• Data for: Single-cell sequencing reveals transcriptional and immunogenetic diversity in stereotyped chronic lymphocytic leukemia#638736api.researchdata.se
• A novel DPH5-related diphthamide-deficiency syndrome causing embryonic lethality or profound neurodevelopmental disorder#784289eScholarship
• Sequence analysis of the potato aphid Macrosiphum euphorbiae transcriptome identified two new viruses#609442eScholarship
• PPh₃‑Promoted Remote ε′,ε′-Regioselective (4 + 1) Annulation of Pyrrolidinone-Based MBH Carbonates with 1‑Heterodienes to Access Highly Substituted 1,6-Diazaspiro[4.4]nonenes#259785Figshare
• Coarse-Grained Molecular Dynamics Simulation for Detailed Characterization of Interfacial Interactions within Natural Rubber–Lignin Composites and the Effects of Key Affecting Factors#363818Figshare
• Coarse-Grained Molecular Dynamics Simulation for Detailed Characterization of Interfacial Interactions within Natural Rubber–Lignin Composites and the Effects of Key Affecting Factors#363819Figshare
• Coarse-Grained Molecular Dynamics Simulation for Detailed Characterization of Interfacial Interactions within Natural Rubber–Lignin Composites and the Effects of Key Affecting Factors#363820Figshare
• Tn5Prime, a Tn5 based 5′ capture method for single cell RNA-seq#492108eScholarship
• Serial-femtosecond crystallography reveals how a phytochrome variant couples chromophore and protein structural changes#634706eScholarship
• Machine learning-based drug response prediction in colorectal cancer with reduced features#686250OpenMETU
• Purification of mouse hepatic non-parenchymal cells or nuclei for use in ChIP-seq and other next-generation sequencing approaches#491824eScholarship
• A genome assembly for the southern Pacific rattlesnake, Crotalus oreganus helleri, in the western rattlesnake species complex#1038685eScholarship
• Accurate Determination of Atomic-Level Segregation at the Rare-Earth-Doped Al₂O₃ Grain Boundary#266445Figshare
• Clades of huge phages from across Earth’s ecosystems#620019eScholarship
• Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus#683896eScholarship
• Co-expression networks reveal the tissue-specific regulation of transcription and splicing#620030eScholarship
• Joint-specific DNA methylation and transcriptome signatures in rheumatoid arthritis identify distinct pathogenic processes#624338eScholarship
• The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis#683840eScholarship
• Efficient Ce³⁺ → Tb³⁺ Energy Transfer in RbY₃F₁₀ Phosphor for High-Contrast Latent Fingerprint Visualization#320121Figshare