genomics

Documents about genomics

• Human herpesvirus 7 integrates into host telomeres via its telomeric repeat arrays#158308PLOS
• Circos: An information aesthetic for comparative genomics#6484OpenAlex
• LSTM-attention-guided graph neural networks for integrated genotype–Environment modeling in maize yield prediction#209845PLOS
• Genomic and functional characterization of a novel halophilic bacteriophage targeting carbapenem-resistant <i>Klebsiella pneumoniae</i>#236518PLOS
• FusionPHI: A phage-host interaction prediction network model based on attention-driven multi-modal feature fusion#477070PLOS
• Comparative genomics-based development of a LAMP assay for rapid and reliable in-field detection of <i>Fusarium oxysporum</i> f. sp. cubense tropical race 4#143875PLOS
• Component systems: Do null models explain everything?#327598PLOS
• The wild, wild west of plasmids: First insights into comparative genomics of <i>Borrelia burgdorferi</i> sensu lato#162591PLOS
• Detection of Coxsackievirus A24v during an acute haemorrhagic conjunctivitis outbreak in Dar es Salaam, Tanzania, January-February 2024#313070PLOS
• The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data#6734OpenAlex
• Genomic diversity analysis enables development of pan-Dengue Toehold RNA sensors#18886PLOS
• Conservation status of two Italian local poultry breeds: Faraona Camosciata and Oca Padovana#206887Research Data Unipd
• Field trial analyses of wheat and cassava benefit from spatial correction#469506PLOS
• Genome analysis of <i>Lactiplantibacillus plantarum</i> and <i>Levilactobacillus brevis</i> isolated from traditionally fermented Ethiopian kocho and their probiotic properties#120233PLOS
• Characterization of the first complete genome sequence of yellow fever virus (YFV) in Sierra Leone: Implications for public health#197010PLOS
• Ensuring best practice in genomics education and evaluation: reporting item standards for education and its evaluation in genomics (RISE2 Genomics)#329991Enlighten Publications
• Genomic characterization of multidrug-resistant <i>Escherichia coli</i> isolated from gills of <i>Labeo rohita:</i> Insight into resistome, virulence and pathogenicity#313067PLOS
• AIEdit: Alignment-free genome assembly polisher trained on spaced seed match patterns#158307PLOS
• Highly frequent undesired insertional mutagenesis during <i>Drosophila</i> genome editing#355233PLOS
• Comparative Genomics Reveals the Ancestral Recombination Landscape of Placental Mammals#151562bioRxiv / medRxiv
• Life Identification Numbers: A strain nomenclature approach to aid epidemiological surveillance of bacterial pathogens#258665PLOS
• Biofilm-derived curli and Z-DNA shape anti-DNA antibody responses during Salmonella infections#368466PLOS
• Herpes simplex virus detection and genomes from under-sampled, remote populations#400168PLOS
• The value of a prophage-borne defense system in phage–phage competition#672179PLOS
• Development of a rapid <i>comQ</i>-targeted quantitative polymerase chain reaction assay for specific identification and quantification of <i>Bacillus subtilis</i> subsp. <i>natto</i>#425466PLOS
• Centromere sequences and annotations of HGSVC3, HPRC and Platinum pedigree genomes#212899Figshare
• Methylviologen resistance in loss-of-function mutants of the polyamine transporter gene <i>OsLAT5</i>#18892PLOS
• RNA metagenomic profiling of mosquito viromes associated with Vector-Borne diseases in Quebec, Canada#263303PLOS
• Longitudinal analysis of high-risk HPV infections reveals within-host viral genome changes over time#372095PLOS
• Multi-year evaluation and release of improved soybean lines for resistance to Phomopsis seed decay#483565PLOS
• Editorial: Restoration genetics and genomics#291262edoc-Server
• Farm animal genomics and informatics: an update#335676OpenAlex
• Fine-mapping candidate neuropsychiatric regulatory variants using cell type-aware comparative genomics#379830bioRxiv / medRxiv
• Phage-plasmid-like elements are found throughout diverse environments and encode niche-specific functional traits#240423PLOS
• <i>Streptococcus didelphis</i> infection in free-ranging white-eared opossum (<i>Didelphis albiventris</i>) and Brazilian common opossum (<i>Didelphis aurita</i>): pathology, microbiologic, and genomic characterization#146542PLOS
• Direct LAMP for on-site rapid detection of <i>Vibrio parahaemolyticus</i> in shrimp (<i>Litopenaeus vannamei</i>) aquaculture water#143878PLOS
• Comparative analysis of seven types of phosphate transporters in forty species from the phylogenetic and transcriptomic perspective#214333PLOS
• Genomic Insights into the Giant Shank Phenotype of Dong Tao Chickens Reveal Candidate Loci Involved in Skeletal Growth and Development#277500Research Data Unipd
• Whole-genome characterization of halotolerant <i>Enterobacter roggenkampii</i> OSNO4 and its potential for climate-resilient agriculture#292693PLOS
• Evidence for the fixation of gene duplications by positive selection in <i>Drosophila</i>#641557DigitalCommons@University of Nebraska
• Phylogeny-aware comparative genomics of#351943PubMed
• Supplementary material for Genomic drivers of coat pattern in West African leopards#614842Figshare
• Geranium: Multimodal Retrieval of Genomics Data Visualizations#15975OSF
• Scalable multi-group nonnegative spatial factorization for spatial genomics data with cell-type heterogeneity#419949bioRxiv / medRxiv
• NCBI GEO: archive for functional genomics data sets—update#6507OpenAlex
• Comparative prevalence of the mercury resistance gene <i>merA</i> in human feces, food, and environmental water from Japan, Vietnam, and Ghana#672177PLOS
• A vision for the future of genomics research#10571OpenAlex
• Functional genomics reveals mediators of beta cell survival in ER stress and type 2 diabetes risk#148844bioRxiv / medRxiv
• The Genomic Evolution of Firefly Odorant Receptors#177572Bucknell Digital Commons
• Genomic signatures of population isolation in an endangered European rodent#215379Europe PMC

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