multiple-sequence-alignment

Documents about multiple-sequence-alignment

• The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools#6290OpenAlex
• MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability#6276OpenAlex
• MUSCLE: multiple sequence alignment with high accuracy and high throughput#6277OpenAlex
• Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega#6421OpenAlex
• Minimap2: pairwise alignment for nucleotide sequences#6419OpenAlex
• The Sequence Alignment/Map format and SAMtools#6262OpenAlex
• MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment#6483OpenAlex
• Jalview Version 2—a multiple sequence alignment editor and analysis workbench#6502OpenAlex
• MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform#6398OpenAlex
• CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice#6708OpenAlex
• trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses#6466OpenAlex
• Accounting for sequence insertions and deletions in bioinformatics in ancestral sequence reconstruction#1425850HAL (France)
• Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis#6504OpenAlex
• Interpreting Dolphin Vocal Sequences via Multiple Sequence Alignment#986430arXiv (All)
• BEAST: Bayesian evolutionary analysis by sampling trees#6469OpenAlex
• BABAPPAlign: a multiple sequence alignment engine with a learned residue-level scoring function.#156907NCBI PubMed Central
• Use of ChIP-Seq data for the design of a multiple promoter-alignment method#251448Open Research