spatial-transcriptomics

Documents about spatial-transcriptomics

• Spatial RadiomIcs and TRanscriptomics to the DIscovery of the Cross-link Between Colon Cancer and ChrOnic Kidney Disease#981019ClinicalTrials.gov
• Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics.#151475NCBI PubMed Central
• Identifying batch-integrated domains from spatial transcriptomics via graph autoencoder with contrastive learning based on cross-modality and data augmentation.#227846NCBI PubMed Central
• The Impact of Hyperglycemia on the Host Response to Bacterial-Induced Inflammation in Periodontitis#297902ScholarlyCommons at Penn
• Integrated Multi-Omics and Spatial Transcriptomics Reveal GUK1 as a Prognostic Biomarker Regulated by the TP53-HSF1 Axis in Breast Cancer.#402578NCBI PubMed Central
• OT-knn: A neighborhood-aware optimal transport framework for aligning spatial transcriptomics data#1054739PLOS
• CIPHER: An end-to-end framework for designing optimized aggregated spatial transcriptomics experiments#258666PLOS
• Single-Cell and Spatial Transcriptomics Identify the Mono-S100A4 Subset Associated with Sepsis-Induced Lung Injury via the MIF-(CD74+CD44) Axis.#371513NCBI PubMed Central
• Spatial transcriptomics identifies immune-stromal niches associated with cancer in adult dermatomyositis#485123Europe PMC
• Integrated Single-Cell and Spatial Transcriptomics Reveal SERPINE1 as a Key Link Between Macro_SPP1 Macrophages and Stromal Remodeling in Gastric Cancer.#662730NCBI PubMed Central
• Deciphering immune and cellular reprogramming during the progression from inflammatory bowel disease to colorectal cancer using multi-omics single-cell and spatial transcriptomics.#143204NCBI PubMed Central
• STRUCTURED REPRESENTATION LEARNING FOR MOLECULAR AND WHOLE-SLIDE ANALYSIS IN COMPUTATIONAL PATHOLOGY#371232ScholarBank@NUS
• Single-cell and spatial transcriptomics characterisation of RSPO2(+) nucleus pulposus cells reveals a WNT/FN1-CD44 degenerative axis and therapeutic targets in IVDD.#621042NCBI PubMed Central
• Calibrating tissue level PDE models of ligand dynamics using single cell and spatial transcriptomics data#142573HAL (France)
• Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte shifts in epileptogenesis beyond the hippocampus#274262HAL (France)
• PaSTel: Anchoring Histology in Spatial Transcriptomics via Multi-Scale Hierarchical Bio-Prior Contrastive Pretraining#609339arXiv (OAI Expanded)
• <i>Spatial Transcriptomics Reveals Ctsk</i>^<em>+</em><i>/Piezo1</i>^<em>+</em><i> Periosteal Progenitor Cells Mediating Mechanical Responses</i>#296722Figshare
• Characterizing intra- and intertumor heterogeneity in ovarian high-grade serous carcinoma subtypes using single-cell and spatial transcriptomics#484926Europe PMC
• Spatial transcriptomics unveils immune cellular ecosystems associated with patient survival in diffuse large B-cell lymphoma.#123386PubMed
• Selective reduction of KCNA4 in vulnerable glutamatergic-serotonin neurons of the dorsal raphe nucleus in Alzheimer's disease#212948Europe PMC
• Single-cell and spatial transcriptomics reveal that the CXCL12-CXCR4 axis drives the immune-desert phenotype in small cell lung cancer by recruiting immunosuppressive CXCR4(+) neutrophils and S100A8(+) monocytes.#135901NCBI PubMed Central
• A Coupled Reaction-Diffusion Model of Promoting and Suppressing Interactions Among Cancer Hallmarks in Endometrial Cancer#651024BYU ScholarsArchive
• Replication Data for: GLP1-E2 Therapy Delays Autoimmune Diabetes in Late-stage Prediabetic NOD Mice and Potentiates Low-dose Anti-CD3 Therapy for Enhanced Disease Protection#231862KU Leuven RDR Dataverse OAI Archive
• Computational pathology annotation enhances the resolution and interpretation of breast cancer spatial transcriptomics data#271190api.researchdata.se
• Multimodal Spatial Transcriptomics Reveals the Developing Human Liver Niche at Single-Cell Resolution#612182eScholarship