transcriptome

Documents about transcriptome

• StringTie enables improved reconstruction of a transcriptome from RNA-seq reads#6756OpenAlex
• AET5: A transcriptome-guided molecular generation framework with contrastive self-supervised learning#679670PLOS
• Differential analysis of Short chain fatty acids incubation in autistic organoids based on transcriptome sequencing#263304PLOS
• Heart Failure and Aortic Stenosis Transcriptome#858645ClinicalTrials.gov
• Differential Study of Muscle Transcriptome#909818ClinicalTrials.gov
• Identification of SERPINE1 as a regulator of glioblastoma cell dispersal with transcriptome profiling#955833Koc University Digital Collections
• Ten quick tips for spatial transcriptomics analysis#928022PLOS
• Cell type-agnostic transcriptomic signatures enable uniform comparisons of neural maturation#13953PLOS
• Multi-ancestry transcriptome prediction with functionally informed variants in TOPMed MESA improves performance of transcriptome-wide association studies.#13600NCBI PubMed Central
• Challenges and progress in RNA velocity: Comparative analysis across multiple biological contexts#248077PLOS
• A Pilot Analysis of Whole Transcriptome of Human Cryopreserved Sperm#988051IRIS
• Histology-informed spatial domain identification through multi-view graph convolutional networks#248074PLOS
• RasGRF1 disruption causes retinal photoreception defects and associated transcriptomic alterations#294487Gestión del Repositorio Documental de la Universidad de Salamanca
• Mechanistic study on comorbidities of kidney stones and sepsis using transcriptome sequencing combined with single-cell spatial transcriptome sequencing.#388727NCBI PubMed Central
• Ten quick tips for causal analysis of biomedical omics data#473119PLOS
• Transcriptome Assembly and Characterization of Chemoreceptors for Corn Rootworms#995716DigitalCommons@University of Nebraska
• Transcriptomic and metabolomic analysis of allelopathic responses in <i>Elymus nutans</i>#228208PLOS
• Breast cancer clustering integrating complete gene expression profiles and genetic ancestry#400165PLOS
• External transportability of bacterial- and viral-associated host-response modules across public transcriptomic cohorts#679669PLOS
• Full-length transcriptome assembly from RNA-Seq data without a reference genome#6726OpenAlex
• Systematic prioritization of potential therapeutic targets for glomerulonephritis using multi-omics Mendelian randomization#18895PLOS
• Culture-specific transcriptional drifts limit the fidelity of organoid infection models#258672PLOS
• Why biology must prioritize data reanalysis in the era of artificial intelligence#393153PLOS
• Spatially localized immune metaprograms reveal micro-niche organization in the human Dorsal Root Ganglion#425471PLOS
• Hepatic transcriptomic landscape of chicken reveals host responses to spotty liver disease#976633PLOS
• CIPHER: An end-to-end framework for designing optimized aggregated spatial transcriptomics experiments#258666PLOS
• Endogenous viral elements trace the ancient origins and early evolution of the <i>Caulimoviridae</i>#316312PLOS
• STATISTICAL METHODS AND ANALYSES FOR CELL-TYPE-AWARE TRANSCRIPTOME-WIDE ASSOCIATION STUDIES#357810ScholarBank@NUS
• Transcriptomic meta-analysis identifies dysregulated pathways and potential therapeutic targets in Vestibular Schwannoma#358727PLOS
• Bioinformatics analysis and qRT-PCR validation of iron metabolism-related genes in pediatric asthma#13948PLOS
• Exploration of schizophrenia-associated gene modules using graph theory, co-expression networks, and dimensionality reduction#13950PLOS
• Integrative bioinformatic analysis prioritizes TIMP1 and FN1 as angiogenesis-related candidate genes in diabetic foot ulcers#180468PLOS
• Transcriptome and Cellular Evidence of Depot-Specific Function in Beef Cattle Intramuscular, Subcutaneous, and Visceral Adipose Tissues#333859HAL (France)
• Macrophage-mediated antibiotic evasion and competitive dominance of <i>mcr-3</i>-carrying <i>Escherichia coli</i>#368464PLOS
• IBAS: Interaction-bridged association studies discovering novel genes underlying complex traits#461613PLOS
• Transcriptome profile of delayed mortality in patients with invasive group A Streptococcal disease#465489PLOS
• <i>Staphylococcus aureus agr</i>-type vs genetic background: molecular signatures determining differential metabolism and virulence potential#255563PLOS
• A novel reusable transcriptome-wide association study workflow used to map key genes linked to important cattle traits#408717HAL (France)
• Fumarate-associated immunometabolic network in Periodontitis revealed by integrated transcriptomic and single-cell RNA sequencing analysis#431413PLOS
• Integrative bioinformatics analysis identifies gut microbiota-derived metabolite-associated immune candidate targets in high-risk primary biliary cholangitis#453131PLOS
• High AUROC can mask decision failure in sepsis transcriptomic classifiers: Preprocessing stability outweighs post hoc calibration across cohorts#646438PLOS
• Small RNAs, Degradome, and Transcriptome Sequencing Provide Insights into Papaya Fruit Ripening Regulated by 1-MCP#20341DOAJ
• Xanthomonas transcriptome inside cauliflower hydathodes reveals bacterial virulence strategies and physiological adaptations at early infection stages#430256HAL (France)
• A bioinformatic single-cell and structure-informed framework identifies a baicalin–CA2–keratinocyte state axis in atopic dermatitis#686602PLOS
• Precision Therapy Based on Immune Microenvironment by Transcriptome Sequencing of Osteosarcoma, a Prospective, Multi-cohort Exploratory Clinical Study#980302ClinicalTrials.gov
• Beyond Clavulanic Acid biosynthesis: Exploring the broad regulatory impact of BldD in <i>Streptomyces clavuligerus</i> ATCC 27064#123678PLOS
• BnaA07.SUC2 regulated by BnaA05.MYC2 in jasmonate pathway promotes oilseed rape susceptibility to <i>Plasmodiophora brassicae</i>#154957PLOS
• Immunomodulatory effects of a multi-component pharmacological intervention on diabetic peripheral neuropathy in type 2 diabetic rats: An exploratory study#258669PLOS
• Transcriptome, metabolome, and inflammatory and oxidative properties of Clostridium butyricum CB1002 clinical strain and its isogenic mutant Δ hbd#280266HAL (France)
• DMS-informed secondary structure modeling of Epstein–Barr Virus LMP-1 pre-mRNA defines novel elements spanning introns#335924PLOS

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