whole-genome-sequencing

Documents about whole-genome-sequencing

• Combined analysis of chromatin accessibility, promoter interactions and whole genome sequencing solved the missing heritability in gastric cancer#127879bioRxiv / medRxiv
• Combined analysis of chromatin accessibility, promoter interactions and whole genome sequencing solved the missing heritability in gastric cancer#132267Unpaywall
• Development and Evaluation of an ARTIC-Based Amplicon Sequencing Assay for Whole-Genome Characterization of Respiratory Syncytial Virus#161693Unpaywall
• Structural variation data from a Dutch European flat oyster (Ostrea edulis) population#425775SEANOE
• Whole-genome sequencing and biosynthetic gene cluster analysis of Bacillus subtilis BAGL as a potent antifungal biocontrol agent against phytopathogenic fungi.#25709NCBI PubMed Central
• Whole Genome Sequencing Reveals a <i>RET</i> Enhancer Risk Haplotype Associated with Hirschsprung Disease in Mowat Wilson Syndrome#130522Unpaywall
• Genomic Epidemiology to Inform Infection Control and Clinical Decision-Making#167689Harvard DASH
• Population analysis and host-disease associations of Shiga toxin-producing Escherichia coli from various sources across eleven European countries using whole genome sequencing#230224bioRxiv / medRxiv
• Using HiFi Long-Read Whole Genome Sequencing To Enhance Diagnosis In Patients With Subfertility And/Or Recurrent Pregnancy Loss#264619bioRxiv / medRxiv
• Whole-genome sequencing reveals a previously unrecognized measles virus cluster in Burundi#327595PLOS
• Role of High-Throughput Whole Genome Sequencing for the Diagnosis and Care of Atypical Diabetes#448236ClinicalTrials.gov
• The Individualized M(X) Drug-resistant TB Treatment Strategy Study#800597ClinicalTrials.gov
• Whole-genome sequencing analysis of Salmonella enterica serovar enteritidis isolates in chile provides insights into possible transmission between gulls, poultry, and humans#948586Repositorio de Universidad Autónoma de Chile.
• Whole-genome sequencing and integrative genomic data-driven profiling of Carbapenems-resistant Klebsiella pneumoniae isolated from human urine samples in the Iraq.#4064NCBI PubMed Central
• Additional file 2 of Whole genome sequencing to inform the epidemiology of Plasmodium falciparum malaria in the elimination setting of Malaysia#211424LSHTM Data Compass
• Comprehensive assessment of on- and off-target mutagenesis via lipid nanoparticle delivery of CRISPR-Cas9 genome editing#315205Kyoto University Research Information Repository
• Comprehensive assessment of on- and off-target mutagenesis via lipid nanoparticle delivery of CRISPR-Cas9 genome editing#315209Kyoto University Research Information Repository
• RiSpy: a feature selection-based fingerprinting framework for accurate identification of genome-edited rice lines#442566HAL (France)
• Long-distance gene flow and recombination shape the evolutionary history of a maize pathogen#156386HAL (France)
• Implementing whole genome and transcriptome sequencing for cancer patients in routine healthcare: a comprehensive guide to costing#248661Springer Nature OA
• Addressing the Global Diagnostics Gap for Childhood Leukemias: A Global, Multisite Type 2 Hybrid Validation Study of Nanopore-based Adaptive Sampling Whole Genome Sequencing#293990bioRxiv / medRxiv
• Gene-Set Based Rare Variant Association Analysis of Whole Genome Sequencing Data in the Portuguese Island Collection for Schizophrenia and Bipolar Disorder#321466bioRxiv / medRxiv
• Comparative genomics of Listeria species isolated from the meat processing chain in South Africa#345977University of Pretoria Repository
• Questions and Answers on Deliverable 12: Comments on the Inter-EURL guidance for the validation of Whole Genome Sequencing for accreditation#407446Zenodo (CERN)
• Telomeric repeat diversity across Nepomorpha (Hemiptera, Heteroptera) revealed by whole-genome sequencing data#417096ARPHA OAI-PMH Endpoint
• Integrated Analysis of SNPs and Structural Variations via High-depth Whole-genome Sequencing Reveals the Genetic Architecture and Optimizes Genomic Prediction in Chickens.#480911NCBI PubMed Central
• Geographical distribution of Mycobacterium tuberculosis complex lineages in sub-Saharan Africa: An interactive review.#14420HAL (France)
• Whole-genome sequencing to investigate the prevalence and transmission of multidrug-resistant Gram-negative pathogens in an adult intensive care unit in the UK.#160049NCBI PubMed Central
• Development of a low-coverage whole genome sequencing screen for apomixis using a diverse set of <i>Malus</i> germplasm#672169PLOS
• Study of Ibrutinib in Patients With Symptomatic, Previously Untreated Waldenstrom's Macroglobulinemia, and Impact on Tumor Genomic Evolution Using Whole Genome Sequencing#810698ClinicalTrials.gov
• Population Genomic Diversity of France#827441ClinicalTrials.gov
• Staphylococcus pettenkoferi : an underrecognized species with clinically relevant antimicrobial resistance. A comprehensive genomic European study#983860HAL (France)
• Investigating tumorigenesis risk and the genetic aetiology of serrated polyposis syndrome#1005430The University of Melbourne Library Digital Repository
• Democratizing Clinical Tumor Whole Genome Sequencing: 18-hour End-to-end Analysis via Trillion-parameter Large Language Models Locally Deployed on Consumer-grade Hardware#1011352arXiv (All)
• Identification et validation de nouvelles mutations et de nouveaux gènes impliqués dans les troubles de neurodéveloppement avec et sans épilepsie#333896HAL (France)
• Typhi mykrobe : fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi#278390University of Pretoria Repository
• Histoplasmose chez les personnes vivant avec le VIH en Côte d'Ivoire#157556HAL (France)
• Genomic epidemiology and phylogeographic reconstruction of West Nile virus 2 in Italy from 2011 to 2023#5329Europe PMC
• Environmental reservoirs of high-risk ESBL- and carbapenemase-producing E. coli and Klebsiella in maternity wards in Yaounde (Cameroon): Whole-genome sequencing and antimicrobial susceptibility studies#13937bioRxiv / medRxiv
• Molecular diversity and antimicrobial susceptibility of Streptococcus equi ssp. equi isolates from equines#235429JLUpub
• Species-aware interpretation of vancomycin-related genomic signals in poultry-derived Enterococcus spp.: a confirmatory phenotyping and whole-genome sequencing framework for One Health surveillance.#433987NCBI PubMed Central
• Investigation of an outbreak of Shigella sonnei bla (CTX-M-3) among men in England, 2025-26, using long- and short-read whole-genome sequencing.#457736NCBI PubMed Central
• The public health utility of whole genome sequencing: Insights from a tuberculosis outbreak in Australia and perspectives of public health professionals#679660PLOS
• Analyzing the Urine During BCG Instillation in Bladder Cancer Patients for Disease Followup#835749ClinicalTrials.gov
• GENOM Aureobasidium melanogenum DAN Pseudozyma hubeiensis SERTA PERANNYA DALAM DEKONTAMINASI AFLATOKSIN B1 DAN PENGENDALIAN Aspergillus flavus PADA BIJI PALA#257852IPB Scientific Repository
• The TyphiNET data visualisation dashboard: unlocking Salmonella Typhi genomics data to support public health#301196HAL (France)
• Analysis of short tandem repeats linked to polyglutamine diseases from whole-genome sequencing reveals intermediate alleles of \textitHTT associated with an early disease onset in \textitC9orf72 carriers#360067HAL (France)
• Linking suspects to an illegally felled incense tree (&lt;i&gt;Aquilaria sinensis&lt;/i&gt;) using DNA forensics#676380Europe PMC
• Enhancing Genomic Laboratory Reports to Enhance Communication and Empower Patients#1030589ClinicalTrials.gov
• "I don't think I even thought of myself" A mixed-methods study of family experiences of trio germline whole genome sequencing in newly diagnosed childhood cancer.#15219NCBI PubMed Central