genome-assembly

Documents about genome-assembly

• DIPLOID GENOME POLISHING AND ASSEMBLY USING SOLID K-MERS#254793ScholarBank@NUS
• Genome assembly of Huangzhou radish#480335Figshare
• Full-length transcriptome assembly from RNA-Seq data without a reference genome#6726OpenAlex
• The genome assembly and annotation of Schizopygopsis younghusbandi#403926Figshare
• Establishing Benchmark Criteria for Single Chromosome Bacterial Genome Assembly#995701DigitalCommons@University of Nebraska
• Chromosome-scale genome assembly and annotation of the two-spotted cricket <i>Gryllus </i><i>bimaculatus</i> (Orthoptera: Gryllidae)#384369Figshare
• Genome alignments, phylogenies, and QC data for 66 complete algal plastome assemblies and annotations#377649Figshare
• Noni genome and annotation#350244Figshare
• Genome assembly and annotation files of the earthworm eel Nagaichthys filipes#922308Figshare
• <b>Chromosome-level genome assembly of </b><b><i>Corizus hyoscyami</i></b><b> </b><b>(Linnaeus, 1758) (Heteroptera: Rhopalidae)</b>#261765Figshare
• Assembly and annotation of the 'Golden Delicious' Doubled-Haploid GDDH18 apple genome#147647HAL (France)
• <b>Revisiting the genome assembly of </b><b><i>Lupinus </i></b><b>species reveals differential diploidization after a shared whole-genome duplication</b>#294275Figshare
• A chromosome -level assembly of the pine processionar y moth (Thaumetopoea pityocampa) genome#357524HAL (France)
• Telomere-to-telomere Schizosaccharomyces japonicus genome assembly reveals hitherto unknown genome features#477175PubMed Central
• AIEdit: Alignment-free genome assembly polisher trained on spaced seed match patterns#158307PLOS
• Alignment of Next-Generation Sequencing Reads#976473OpenAlex
• A Chromosome-Scale Genome Assembly of the Flax Rust Fungus Reveals the Two Unusually Large Effector Proteins, AvrM3 and AvrN#196926Open Research
• Endangered Steppe Eagle (Aquila nipalensis) (Aves, Accipitriformes, Accipitridae) genome and mitogenome assembly: A resource for molecular evolution and comparative genomics#271238ARPHA OAI-PMH Endpoint
• <b>Chromosome‑level genome assembly and annotation of the duckweed </b><b><i>Spirodela polyrhiza</i></b><b> (L.) Schleid.</b>#458452Figshare
• <b>Chromosome level genome assembly and gene evolution of electric eel (</b><b><i>Electrophorus varii</i></b><b>)</b>#304130Figshare
• A Chromosome-Scale Genome Assembly of the Flax Rust Fungus Reveals the Two Unusually Large Effector Proteins, AvrM3 and AvrN#464304HAL (France)
• Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases#465581OpenAlex
• Genome assembly with variable order de Bruijn graphs#10041bioRxiv / medRxiv
• A reference genome assembly for Quercus canariensis Willd#214774bioRxiv / medRxiv
• Sequencing and Comparative Analysis of <em>de novo</em> Genome Assemblies of <em>Streptomyces aureofaciens</em> ATCC 10762#995685DigitalCommons@University of Nebraska
• Transforming Life Science Through Chromosome‐Level Genome Assemblies#653888OKAYAMA UNIVERSITY SCIENTIFIC ACHIEVEMENT REPOSITORY
• Chromosome-scale genome assembly of diploid halophyte Thinopyrum bessarabicum excludes J genome from polyploid ancestry#374139Europe PMC
• Chromosome-level genome assembly of the Poitevin stickleback (Pungitius vulgaris)#624876HAL (France)
• Improving genome assembly by identifying reliable sequencing data#1017288RUcore, Rutgers University Community Repository
• Chromosome-level genome assembly and population genomics analysis of &lt;i&gt;Camellia rubituberculata&lt;/i&gt; provide insights into adaptation to karst habitats#67642Europe PMC
• FLASH: fast length adjustment of short reads to improve genome assemblies#6751OpenAlex
• A reference dataset of 66 high-quality plastid genomes spanning diverse algal lineages#370221Figshare
• Holistic genome assembly and analysis of the Tremella fuciformis interaction community uncovers intergenomic insights beyond dual genomes#310602ARPHA OAI-PMH Endpoint
• Conserved assembly architecture of the essential herpesvirus packaging accessory factor#679672PLOS
• BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs#6446OpenAlex
• Evolutionary and biomedical insights from a marmoset diploid genome assembly#242877Ora Oxford University Research
• Genome assembly of the ectomycorrhizal fungus <i>Thelephora ganbajun</i>#261791Figshare
• Vespa simillima RNA annotation#382028Figshare
• <i>Portunus pelagicus</i> assembly and annotations file#983681Figshare
• Chromosomal scale genome assembly of medicinal plant Sophora tonkinensis.#988575NCBI PubMed Central
• Long-read, high-coverage reference genome of the nymphalid butterfly Catonephele acontius (Nymphalidae: Biblidinae)#684705Europe PMC
• Gene annotation and RepeatMasker outputs for the Japanese eel (<i>Anguilla japonica</i>) chromosome-scale genome assembly J-eel 3.4#652475Figshare
• De novo genome assembly and annotation of Gnathostoma spinigerum.#209554NCBI PubMed Central
• Quinoa genome assembly employing genomic variation for guided scaffolding#261999HAL (France)
• A near-complete genome assembly of the Fusarium oxysporum keratitis isolate MRL8996#440237bioRxiv / medRxiv
• Data files related to Pearl millet draft genome assembly v1.1, scaffolds and annotations#931964ICRISAT Dataverse Dataverse OAI Archive
• Fast and accurate short read alignment with Burrows–Wheeler transform#6266OpenAlex
• First draft genome assembly of the desert locust, Schistocerca Gregaria#456188University of Pretoria Repository
• Chromosome-scale genome assembly of the European common cuttlefish Sepia officinalis.#239759NCBI PubMed Central
• Unveiling centromeric retrotransposon dynamics through a high-quality rye genome assembly.#461546NCBI PubMed Central