single-cell-analysis

Documents about single-cell-analysis

• Single-cell atlas of the developing Down syndrome brain cortex#686905Spiral
• Single-cell phenotypic analysis and multiplet detection through incorporation of microscopy data into cellenONE-based single-cell proteomic data analysis#367202Europe PMC
• Analysis scripts for the tomato adventitious root single-cell and single-nucleus study#614838Figshare
• Single cell trajectories#212307TUdatalib System
• Single cell data#219898TUdatalib System
• Causal inference for live-cell imaging and single-cell multi-omics data#923028HAL (France)
• Gene network inference from single-cell omics data and domain knowledge for constructing COVID-19-specific ICAM1-associated pathways#257703HAL (France)
• Dissecting biological “dark matter” with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth#488672SJSU ScholarWorks
• Single-cell splicing analysis with ISSAC links cell type specific and cell state-dependent sQTLs to neurological disorders#264595bioRxiv / medRxiv
• ILF3 regulates erythroid differentiation: A single-cell transcriptomic analysis and cellular experiment#646439PLOS
• Interactive analysis of single-cell epigenomic landscapes with ChromSCape#142489HAL (France)
• Federated single-cell QTL meta-analysis reveals novel disease mechanisms#180157bioRxiv / medRxiv
• Inferring molecular mechanisms at cellular and multicellular scales from single-cell multi-omics data#370780HAL (France)
• Single-cell transcriptomic analysis reveals the immunosuppressive status of NK cell subpopulations in TNBC.#396063NCBI PubMed Central
• Single-cell transcriptomic analysis reveals the immunosuppressive status of NK cell subpopulations in TNBC#396689PLOS
• Miniaturized chromatography-based lipidomics methods towards single-cell analysis.#280887NCBI PubMed Central
• Single-cell analysis of adaptive NK and CMV-specific T-cell dynamics after allogeneic HSCT.#631124NCBI PubMed Central
• p53 dynamics in single cells are temperature-sensitive#219905TUdatalib System
• Bioinformatics analysis and single-cell RNA sequencing: elucidating the ubiquitination pathways and key enzymes in lung adenocarcinoma#935980Repositorio de Universidad Autónoma de Chile.
• Single-cell transcriptomic analysis of cutaneous squamous cell carcinoma identifies an NR1H3-associated angiogenic macrophage state.#465186NCBI PubMed Central
• Single-cell and spatial transcriptomics analysis of osteoarthritis: pathway regulation, cell interaction networks, and therapeutic translation.#472404NCBI PubMed Central
• Data Management and Sharing Plan for: Single-cell analysis of cardiac regeneration and repair#207862UNC Dataverse Dataverse OAI Archive
• Single-cell landscape of peripheral and tumor-infiltrating immune cells in HPV-negative HNSCC.#9580PubMed
• SKIM: A fast sketching strategy integrated with model’s dynamic-feedback for large-scale single-cell transcriptomic analysis#443296PLOS
• SPP1 as a Critical Regulator of Cardiac Cell Reprogramming Following Myocardial Infarction Through Single‐Cell Transcriptomic Analysis.#30554NCBI PubMed Central
• Type 17 T-cell subset divergence in hidradenitis suppurativa versus psoriasis: a comparative single-cell transcriptomic analysis.#613488NCBI PubMed Central
• Protocol for using the multi-cellular analysis toolbox in ImageJ for single-cell calcium imaging analysis.#227787NCBI PubMed Central
• Single-Cell Analysis Reveals Inflammatory-Immunosuppressive Niches in Daratumumab-Resistant Primary AL Amyloidosis#143869bioRxiv / medRxiv
• Multi-organ single-cell analysis of preferential expression of CAKUT genes.#150151NCBI PubMed Central
• Single-Cell Omics Analysis of Human Basophils Reveals Two Transcriptionally Distinct Populations.#275601NCBI PubMed Central
• 3D imaging and single-cell analysis reveal cellular heterogeneity of lymphatic valve endothelial cell types#26187HAL (France)
• Single-cell ICP-ToF-MS, ICP-MS, Cell biovolume, and Discriminant analysis data used to establish snow algal ionomes#220376DOIDB Metadata Store
• Integrating bulk and single-cell transcriptomic data to construct a risk model for histidine metabolism-related epithelial cell features in lung adenocarcinoma, predicting prognosis and immune landscape.#140928PubMed
• Table 1_Integrative single-nucleus transcriptomic analysis identifies UBE2C+ proliferative tumor cells and immune-stromal regulatory crosstalk in small cell lung cancer.docx#424573Figshare
• An Integrated Single-Cell and Epigenomic Resource for Comparative Analysis of the Basal Ganglia#346366Zenodo (CERN)
• scHiCcompare: An R Package for Differential Analysis of Single-cell Hi-C Data.#421042NCBI PubMed Central
• Single-cell transcriptomic analysis reveals age-related remodeling of brain endothelial cells.#440705NCBI PubMed Central
• VACV LC3 lipidation Screen Dataset#686835RODARE
• RareCapsNet: An explainable capsule network enables robust discovery of rare cell populations from large-scale single-cell transcriptomics#443297PLOS
• Single-cell multi-omic integration analysis prioritizes druggable genes and reveals cell-type-specific causal effects in glioblastomagenesis#143853bioRxiv / medRxiv
• Single-cell multi-omic integration analysis prioritizes druggable genes and reveals cell-type-specific causal effects in glioblastomagenesis#147935Unpaywall
• Single Cell Analysis of Oncogenic Signalling in Intestinal Organoids#279801edoc-Server
• Integrative analysis of single-cell sequencing identifies CD8(+) TIM3(+) CD101(+) T cell-associated genes as prognostic biomarkers in breast cancer.#685564NCBI PubMed Central
• Utilising Machine Learning and Single-Cell Analysis to Uncover SKCM Metastasis-Related Genes.#3732NCBI PubMed Central
• scSurvival: Single-Cell Survival Analysis of Clinical Cancer Cohort Data at Cellular Resolution.#150157NCBI PubMed Central
• Single-cell transcriptomic analysis reveals APOE genotype-dependent sex differences in Alzheimer's disease.#174449NCBI PubMed Central
• scTACL: a multitask topology-aware contrastive learning approach for single-cell transcriptomics analysis.#312561NCBI PubMed Central
• Dissecting immunosuppressive microenvironment in chemotherapy-resistant colorectal cancer through single-cell transcriptomic analysis.#380887NCBI PubMed Central
• TelomereHunter2: improved in silico telomere analysis software for precision oncology and single-cell studies.#368039NCBI PubMed Central
• A Comprehensive Comparative Analysis of Sequence‐Based Deep Learning Models for Single‐Cell Genomics.#483415NCBI PubMed Central