rna-sequencing

Documents about rna-sequencing

• Advanced deep learning strategies in nanopore RNA sequencing#4643Europe PMC
• Advanced deep learning strategies in nanopore RNA sequencing.#9716PubMed
• Benchmarking immunoinformatic repertoire assemblies from bulk RNA-seq and PCR-based V(D)J sequencing using PCR-free SMRT RNA sequencing#1000637HAL (France)
• Direct RNA Sequencing of Dengue and Chikungunya Viruses with Ultra-Low Input and Custom Multiplexing#326280HAL (France)
• RNA-Seq: a revolutionary tool for transcriptomics#6790OpenAlex
• Validation of Human Retinal Organoid Derived Photoreceptors through Single-cell RNA Sequencing#983577eScholarship
• IVT-seq reveals extreme bias in RNA-sequencing#954662Koc University Digital Collections
• Relapse vs Diagnosis in BEAT‑AML (Tyner et al., 2018; PMID: 30333627) : A Reproducible Single‑Block Workflow Demonstrating Proof‑of‑Principle for DRA#632397Zenodo (CERN)
• Characterizing cancer phenotypes and their tumor microenvironment across malignant progression using single-cell RNA sequencing data#202397Harvard DASH
• Processing and analysis of large scale spatial transcriptomic sequencing data#261742edoc-Server
• Computational methodology for analysis of cell type specific RNA isoform expression with long read sequencing#471862HAL (France)
• Good DNA- and sufficient RNA integrity in formalin-free paraffin-embedded tissues#455602PLOS
• Single-nucleus RNA sequencing reveals cell type-specific responses to heat stress in bovine mammary gland#642552Europe PMC
• Defining endothelial cell functional heterogeneity and plasticity using single-cell RNA-sequencing#643704Harvard DASH
• Single-cell RNA sequencing unravels mosquito biology and host-pathogen interactions#1218649Europe PMC
• DeCoRE: A computational method to resolve RNA structural heterogeneity from RNA structure probing data by direct RNA sequencing.#1175461NCBI PubMed Central
• scLTF: A self-training clustering framework for large-scale single-cell RNA-Seq data#1081366PLOS
• RNA sequencing applications of a reverse transcriptase from non-LTR R2 retroelements#1106885eScholarship
• Development of a comprehensive single cell RNA sequencing pipeline: pre-processing, quality control and identification of outliers#453463SUNScholar
• Bioinformatics analysis and single-cell RNA sequencing: elucidating the ubiquitination pathways and key enzymes in lung adenocarcinoma#935980Repositorio de Universidad Autónoma de Chile.
• Optimal sequencing depth for single-cell RNA-sequencing in Wasserstein space#1013388arXiv (All)
• Down-regulation of circ0001361 induces apoptosis and suppresses the progression of glioma#13947PLOS
• Direct RNA sequencing and signal alignment reveal RNA structure ensembles in a eukaryotic cell.#182583NCBI PubMed Central
• Direct long-read RNA sequencing uncovers functional variation affecting transcript production and RNA modifications#231425Europe PMC
• RNA sequence data for Lycaeides melissa#456508Wyoming Data Repository Dataverse OAI Archive
• Parallel Sequencing of Fetal Genome and RNA in the Presence of Ultrasound Warning Signs: a Complementary Approach for the Prenatal Diagnosis of Rare Diseases.#1438821ClinicalTrials.gov
• Computational methods for transcriptome-wide identification and characterization of RNA editing sites in paired sequencing samples#226522edoc-Server
• Computational Identification of Repurposable Drug Candidates for Psoriatic Arthritis via Single-Cell RNA Sequencing of Synovial Tissue#174079Zenodo (CERN)
• AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS#6713OpenAlex
• Text encryption through bio-inspired DNA and RNA sequencing.#1142NCBI PubMed Central
• Suco - PBMC#176241Zenodo (CERN)
• Long read sequencing of retinal RNA improves killifish transcriptome annotation#1210498bioRxiv / medRxiv
• Table 3_Uncovering cellular perturbations and key mediator communications in liver cancer using single-cell RNA sequencing.xlsx#325703Figshare
• Table 2_Uncovering cellular perturbations and key mediator communications in liver cancer using single-cell RNA sequencing.xlsx#325704Figshare
• Table 4_Uncovering cellular perturbations and key mediator communications in liver cancer using single-cell RNA sequencing.xlsx#325705Figshare
• Predicting Biomarker of Gastric Cancer Chemotherapy Response#837432ClinicalTrials.gov
• Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies#6991OpenAlex
• Data Sheet 1_Uncovering cellular perturbations and key mediator communications in liver cancer using single-cell RNA sequencing.pdf#325702Figshare
• Aβ1-40 induces venular endothelial cell ferroptosis in cerebral amyloid angiopathy via the ATF3/xCT axis: Insights from single-cell RNA sequencing#1052822Europe PMC
• Benchmarking long-read RNA-seq across modalities, methods, and sequencing depth in iNeurons#151544bioRxiv / medRxiv
• Empowering fungal infection research with single-cell RNA sequencing.#244402NCBI PubMed Central
• RNA Sequencing of Individual Versus Wastewater - SARS-CoV2#1419127ClinicalTrials.gov
• TRANSCRIPTOMIC PROFILING OF HOST IMMUNE RESPONSES TO AGGREGATIBACTER ACTINOMYCETEMCOMITANS (Aa) LEUKOTOXIN A AND CYTOLETHAL DISTENDING TOXIN USING BULK RNA SEQUENCING#316748ScholarlyCommons at Penn
• Comprehensive analysis of mRNA-microRNA-lncRNA expression profiles in post-traumatic elbow heterotopic ossification using RNA sequencing and experimental validation.#9735PubMed
• Targeted High Throughput Sequencing in the Diagnosis of Pediatric Acute Leukemia#1031402ClinicalTrials.gov
• Genomic-Adjusted Radiation Dose from Bulk RNA Sequencing for Personalized Radiotherapy#319777bioRxiv / medRxiv
• Novel roles for CREG1 in hematopoiesis revealed by single-cell RNA sequencing#364023HAL (France)
• Accurate and scalable demultiplexing of single-cell RNA sequencing using BEACON#1483269bioRxiv / medRxiv
• Characterization of METTL3/14-mediated m⁶A modification in human transcriptome using Nanopore direct RNA sequencing#631428PLOS
• Identification of miRNA-OGG1 mRNA Interactions: Small RNA Sequencing and Immunoprecipitation Analysis#939376Louisiana Tech Digital Commons